SLC36A2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC36A2 mutation is significantly associated with the RNA expression of many other genes, with 3,390 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC36A2-associated genes across cancer lineages are KATNA1, TSPY20P, and PSMC3IP. Each is linked with SLC36A2 in more than 2 cancer types. Because this analysis shows association rather than direction, both SLC36A2-to-partner and partner-to-SLC36A2 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC36A2→partner) and Y-score (partner→SLC36A2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMKATNA1 →+0.471+1.893.001.00133
LGGTSPY20P →+0.154+7.977<.001.00733
UCECPSMC3IP →+0.749+3.928<.001<.00133
STADH2ACP1 →+0.204+5.463.004.00533
CESCLINC01442 →+0.026+4.669<.001.00733
SKCMTMTC3 →+0.518+2.251.006.00533
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,390 associations by consensus.

Exploration