SLC35F5

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC35F5 protein abundance is significantly associated with the RNA expression of many other genes, with 2,481 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible SLC35F5-associated genes across cancer lineages are HAS3, UGDH, and RAB25. Each is linked with SLC35F5 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC35F5-to-partner and partner-to-SLC35F5 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC35F5 versus HAS3 in LUAD, with a Pearson correlation of 0.38.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC35F5→partner) and Y-score (partner→SLC35F5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADHAS3 →+1.736+0.552.002.00432
BRCAUGDH →+0.983+0.472.002.00632
LUADRAB25 →+0.817+0.507.001.00432
LSCCCEP20 →+0.571+0.420.006<.00132
UCECDSG3 →+1.984+0.617.003.00332
LUADRIT1 →+0.804+0.625<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,481 associations by consensus.

SLC35F5 vs HAS3 — LUAD

Per-sample scatter of SLC35F5 vs HAS3 in LUAD (Pearson r = 0.38).

Explore this scatter interactively →

Exploration