SLC35F3

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC35F3 RNA expression is significantly associated with the protein abundance of many other proteins, with 17,932 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SLC35F3-associated proteins across cancer lineages are LCN2, MAP1B_S1378, and CAMSAP2_S416. Each is linked with SLC35F3 in more than 3 cancer types. Because this analysis shows association rather than direction, both SLC35F3-to-partner and partner-to-SLC35F3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC35F3 versus LCN2 in GBM, with a Pearson correlation of -0.31.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC35F3→partner) and Y-score (partner→SLC35F3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMLCN2 →-1.109-0.992.003<.00134
LSCCMAP1B_S1378 →+0.870+1.198<.001<.00134
OVCAMSAP2_S416 →+0.745+1.351<.001<.00134
UCECMAP1A_S986 →+1.131+1.007<.001<.00134
LSCCMAP1B_S1620 →+1.009+1.144<.001<.00134
LSCCMAP1B_S1965 →+1.170+1.096<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 17,932 associations by consensus.

SLC35F3 vs LCN2 — GBM

Per-sample scatter of SLC35F3 vs LCN2 in GBM (Pearson r = -0.31).

Explore this scatter interactively →

Exploration