SLC35F3

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC35F3 protein abundance is significantly associated with the RNA expression of many other genes, with 191 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SLC35F3-associated genes across cancer lineages are ABHD4, MMP9, and NDRG1. Each is linked with SLC35F3 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC35F3-to-partner and partner-to-SLC35F3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC35F3 versus ABHD4 in GBM, with a Pearson correlation of -0.79.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC35F3→partner) and Y-score (partner→SLC35F3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMABHD4 →-0.699-0.923.002.00631
GBMMMP9 →+1.758+0.680<.001.00531
GBMNDRG1 →+2.058+0.978<.001.00531
GBMHSD17B1P1 →-0.720-0.856.004.00531
GBMACCS →-1.130-0.910.006.00631
GBMACAD10 →-0.700-0.920.003.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 191 associations by consensus.

SLC35F3 vs ABHD4 — GBM

Per-sample scatter of SLC35F3 vs ABHD4 in GBM (Pearson r = -0.79).

Explore this scatter interactively →

Exploration