SLC35F3

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC35F3 mutation is significantly associated with the total protein of many other genes, with 33 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC35F3-associated genes across cancer lineages are PCNA, MEK1, and PDCD4. Each is linked with SLC35F3 in more than 2 cancer types. Because this analysis shows association rather than direction, both SLC35F3-to-partner and partner-to-SLC35F3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PCNA grouped by SLC35F3-low versus SLC35F3-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC35F3→partner) and Y-score (partner→SLC35F3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECPCNA →+0.209+1.765.009.01433
UCECMEK1 →+0.408+2.700.002.00632
UCECPDCD4 →-0.519-2.000.003.02932
UCECATM →-0.617-2.906<.001.00132
UCECCaspase-7-cleavedD198 →+0.575+1.604.009.04132
UCECChk2 →-0.214-2.459.015.01932
Each partner links to its Q-omics profile. Showing the 6 strongest of 33 associations by consensus.

PCNA by SLC35F3 expression — UCEC

Box plot of PCNA in SLC35F3-low vs SLC35F3-high samples in UCEC.

Explore this box plot interactively →

Exploration