SLC35F2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC35F2 protein abundance is significantly associated with the RNA expression of many other genes, with 3,213 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SLC35F2-associated genes across cancer lineages are MLLT3, MYLIP, and CRYBB3. Each is linked with SLC35F2 in more than 2 cancer types. Because this analysis shows association rather than direction, both SLC35F2-to-partner and partner-to-SLC35F2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC35F2 versus MLLT3 in BRCA, with a Pearson correlation of -0.46.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC35F2→partner) and Y-score (partner→SLC35F2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAMLLT3 →-1.171-1.199.005<.00133
HNSCMYLIP →-0.800-0.393<.001.00433
LSCCCRYBB3 →-0.691-0.452.002<.00132
LSCCSYT16 →+0.459+0.411.002.00432
HNSCRPSAP52 →+1.109+0.493<.001<.00132
HNSCAGFG2 →-0.492-0.430.005.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,213 associations by consensus.

SLC35F2 vs MLLT3 — BRCA

Per-sample scatter of SLC35F2 vs MLLT3 in BRCA (Pearson r = -0.46).

Explore this scatter interactively →

Exploration