SLC35F1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC35F1 protein abundance is significantly associated with the RNA expression of many other genes, with 841 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SLC35F1-associated genes across cancer lineages are APOBEC3H, IL2RB, and ASB2. Each is linked with SLC35F1 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC35F1-to-partner and partner-to-SLC35F1 results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC35F1→partner) and Y-score (partner→SLC35F1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMAPOBEC3H →-0.404-0.667.006<.00131
GBMIL2RB →-0.744-0.807<.001<.00131
GBMASB2 →-0.356-0.577.003<.00131
GBMZFYVE21 →+0.425+0.714.002<.00131
GBMBMP7 →+1.073+0.694<.001<.00131
GBMPRELID3B →+0.393+0.458<.001.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 841 associations by consensus.

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