SLC35F1

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC35F1 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,352 significant associations in total. BONE shows the largest number of these associations.

The most reproducible SLC35F1-associated GO terms across cancer lineages are Epigenetic regulation of gene expression, Protein-DNA complex assembly, and RNA splicing, via transesterification reactions. Each is linked with SLC35F1 in more than 7 cancer types. Because this analysis shows association rather than direction, both SLC35F1-to-partner and partner-to-SLC35F1 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC35F1→partner) and Y-score (partner→SLC35F1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINEpigenetic regulation of gene expression →+0.025+1.460.005.00338
BONEProtein-DNA complex assembly →+0.082+1.803<.001<.00137
BONERNA splicing, via transesterification reactions →+0.071+1.919<.001<.00137
BONERNA splicing, via transesterification reactions with bulged adenosine as nucleophile →+0.072+1.853<.001<.00137
BONEmRNA splicing, via spliceosome →+0.072+1.853<.001<.00137
BONEPeptidyl-lysine acetylation →+0.130+2.572<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,352 associations by consensus.

Exploration