SLC35C1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC35C1 mutation is significantly associated with the RNA expression of many other genes, with 446 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC35C1-associated genes across cancer lineages are MIR676, MIR6864, and OR10A6. Each is linked with SLC35C1 in more than 2 cancer types. Because this analysis shows association rather than direction, both SLC35C1-to-partner and partner-to-SLC35C1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR676 grouped by SLC35C1-low versus SLC35C1-high in LUAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC35C1→partner) and Y-score (partner→SLC35C1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADMIR676 →+0.443+5.044<.001.00933
UCECMIR6864 →+0.648+2.224.001.00832
LUSCOR10A6 →+0.067+5.235<.001.00132
SKCMPPIAL4F →+0.072+4.333.002.00132
LUADRNA5SP162 →+0.697+5.888<.001.00232
UCECRNA5SP417 →+0.529+2.866.001.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 446 associations by consensus.

MIR676 by SLC35C1 expression — LUAD

Box plot of MIR676 in SLC35C1-low vs SLC35C1-high samples in LUAD.

Explore this box plot interactively →

Exploration