SLC35A5

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC35A5 mutation is significantly associated with the RNA expression of many other genes, with 9 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible SLC35A5-associated genes across cancer lineages are PRAMEF26, REG3G, and MAGEB18. Each is linked with SLC35A5 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC35A5-to-partner and partner-to-SLC35A5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PRAMEF26 grouped by SLC35A5-low versus SLC35A5-high in CNS.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC35A5→partner) and Y-score (partner→SLC35A5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CNSPRAMEF26 →+0.270+5.754.005.00231
BLOOD_LeukemiaREG3G →+0.093+4.874<.001.00231
BLOOD_LeukemiaMAGEB18 →+0.124+4.152<.001.00931
BLOOD_LeukemiaVSTM2B →+0.107+4.874<.001.00231
BLOOD_LeukemiaOR8D1 →+0.121+4.539<.001.00731
BLOOD_LeukemiaOR8D2 →+0.111+4.539<.001.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 9 associations by consensus.

PRAMEF26 by SLC35A5 expression — CNS

Box plot of PRAMEF26 in SLC35A5-low vs SLC35A5-high samples in CNS.

Explore this box plot interactively →

Exploration