SLC30A8

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC30A8 mutation is significantly associated with the RNA expression of many other genes, with 2,861 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC30A8-associated genes across cancer lineages are MIR5689, ARF1P1, and ESS2. Each is linked with SLC30A8 in more than 2 cancer types. Because this analysis shows association rather than direction, both SLC30A8-to-partner and partner-to-SLC30A8 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR5689 grouped by SLC30A8-low versus SLC30A8-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC30A8→partner) and Y-score (partner→SLC30A8) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMMIR5689 →+0.098+2.145<.001.00533
LIHCARF1P1 →+0.060+4.758<.001.00632
UCECESS2 →+0.231+2.137.001<.00132
UCECCINP →+0.281+1.731<.001<.00132
SKCMACTR5 →+0.271+2.000.002.00232
UCECSGTA →+0.489+2.606<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,861 associations by consensus.

MIR5689 by SLC30A8 expression — SKCM

Box plot of MIR5689 in SLC30A8-low vs SLC30A8-high samples in SKCM.

Explore this box plot interactively →

Exploration