SLC30A4

Across TCGA patient cohorts, SLC30A4 protein abundance is significantly associated with the RNA expression of many other genes, with 8,813 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SLC30A4-associated genes across cancer lineages are PYCR1, GCAT, and TPD52L2. Each is linked with SLC30A4 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC30A4-to-partner and partner-to-SLC30A4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC30A4 versus PYCR1 in LSCC, with a Pearson correlation of -0.49.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC30A4→partner) and Y-score (partner→SLC30A4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	PYCR1 →	-1.209	-1.003	<.001	<.001	3	2
LSCC	GCAT →	-0.975	-0.858	<.001	.001	3	1
LSCC	TPD52L2 →	-0.436	-0.767	.003	.003	3	1
LSCC	PRPF6 →	-0.439	-0.539	.001	.001	3	1
LSCC	MRGBP →	-0.765	-0.746	<.001	.004	3	1
LSCC	C20orf27 →	-0.575	-0.633	.002	.004	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 8,813 associations by consensus.

SLC30A4 vs PYCR1 — LSCC

Explore this scatter interactively →