SLC2A4RG

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC2A4RG protein abundance is significantly associated with the RNA expression of many other genes, with 1,001 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SLC2A4RG-associated genes across cancer lineages are RPL4P4, PLEKHO1, and PNPLA3. Each is linked with SLC2A4RG in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC2A4RG-to-partner and partner-to-SLC2A4RG results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC2A4RG versus RPL4P4 in BRCA, with a Pearson correlation of -0.41.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC2A4RG→partner) and Y-score (partner→SLC2A4RG) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCARPL4P4 →-0.999-0.596.008<.00132
LSCCPLEKHO1 →-1.333-0.446<.001.00432
BRCAPNPLA3 →-2.692-0.734.002.00831
BRCAPVALB →+4.163+0.633.002.00431
BRCASPRTN →-0.438-0.588.009<.00131
BRCAUBL4A →-0.698-0.582.007<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,001 associations by consensus.

SLC2A4RG vs RPL4P4 — BRCA

Per-sample scatter of SLC2A4RG vs RPL4P4 in BRCA (Pearson r = -0.41).

Explore this scatter interactively →

Exploration