Across TCGA cell cohorts, SLC28A3 mutation is significantly associated with the RNA expression of many other genes, with 27 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible SLC28A3-associated genes across cancer lineages are RNMT, ASPN, and C6orf118. Each is linked with SLC28A3 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC28A3-to-partner and partner-to-SLC28A3 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC28A3→partner) and Y-score (partner→SLC28A3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LARGE_INTESTINE	RNMT →	+0.675	+3.215	.002	.009	3	1
LARGE_INTESTINE	ASPN →	+0.056	+3.600	<.001	.001	3	1
LARGE_INTESTINE	C6orf118 →	+0.118	+2.793	<.001	.002	3	1
LARGE_INTESTINE	TBR1 →	+0.038	+3.748	<.001	.001	3	1
LARGE_INTESTINE	C9orf72 →	+1.002	+3.169	<.001	.005	3	1
LARGE_INTESTINE	SRP19 →	+0.765	+3.064	.001	.009	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 27 associations by consensus.

Exploration

SLC28A3 survival (RNA) · tumor vs normal (RNA) · all SLC28A3 data types