SLC27A3

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC27A3 mutation is significantly associated with the RNA expression of many other genes, with 32 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible SLC27A3-associated genes across cancer lineages are OR6V1, MDGA2, and SLC25A52. Each is linked with SLC27A3 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC27A3-to-partner and partner-to-SLC27A3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR6V1 grouped by SLC27A3-low versus SLC27A3-high in STOMACH.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC27A3→partner) and Y-score (partner→SLC27A3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STOMACHOR6V1 →+0.016+3.662<.001.00132
LARGE_INTESTINEMDGA2 →+0.116+2.591<.001.00831
LARGE_INTESTINESLC25A52 →+0.057+3.567.008.00231
LARGE_INTESTINEVAX1 →+0.556+2.782.001.00731
LARGE_INTESTINEITGAD →+0.009+3.510<.001<.00131
LARGE_INTESTINESSMEM1 →+0.021+2.707.001.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 32 associations by consensus.

OR6V1 by SLC27A3 expression — STOMACH

Box plot of OR6V1 in SLC27A3-low vs SLC27A3-high samples in STOMACH.

Explore this box plot interactively →

Exploration