SLC25A47

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC25A47 mutation is significantly associated with the RNA expression of many other genes, with 767 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible SLC25A47-associated genes across cancer lineages are C6orf118, HHLA1, and SLC22A3. Each is linked with SLC25A47 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC25A47-to-partner and partner-to-SLC25A47 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, C6orf118 grouped by SLC25A47-low versus SLC25A47-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC25A47→partner) and Y-score (partner→SLC25A47) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEC6orf118 →+0.095+2.015<.001.00532
BLOOD_LeukemiaHHLA1 →+0.009+3.551<.001.00931
BLOOD_LeukemiaSLC22A3 →+0.078+4.037<.001.00431
BLOOD_LeukemiaOR1G1 →+0.063+3.705<.001.00731
BLOOD_LeukemiaCCT8L2 →+0.009+3.874<.001.00531
BLOOD_LeukemiaHSD3B2 →+0.034+4.339.005.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 767 associations by consensus.

C6orf118 by SLC25A47 expression — LARGE_INTESTINE

Box plot of C6orf118 in SLC25A47-low vs SLC25A47-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration