SLC25A3

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC25A3 mutation is significantly associated with the RNA expression of many other genes, with 4 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible SLC25A3-associated genes across cancer lineages are OR1L6, OR2J2, and TECRL. Each is linked with SLC25A3 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC25A3-to-partner and partner-to-SLC25A3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR1L6 grouped by SLC25A3-low versus SLC25A3-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC25A3→partner) and Y-score (partner→SLC25A3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEOR1L6 →+0.018+4.022<.001.00631
LARGE_INTESTINEOR2J2 →+0.016+3.632<.001.00331
LARGE_INTESTINETECRL →+0.014+3.977<.001.00131
LARGE_INTESTINEOR5V1 →+0.006+4.022<.001.00631
Each partner links to its Q-omics profile. Showing the 4 strongest of 4 associations by consensus.

OR1L6 by SLC25A3 expression — LARGE_INTESTINE

Box plot of OR1L6 in SLC25A3-low vs SLC25A3-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration