SLC25A1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC25A1 mutation is significantly associated with the RNA expression of many other genes, with 1,896 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC25A1-associated genes across cancer lineages are RNA5SP136, RNU6-1124P, and RNU6-320P. Each is linked with SLC25A1 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC25A1-to-partner and partner-to-SLC25A1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA5SP136 grouped by SLC25A1-low versus SLC25A1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC25A1→partner) and Y-score (partner→SLC25A1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRNA5SP136 →+0.220+2.714.002.00532
STADRNU6-1124P →+0.277+6.070<.001.00231
STADRNU6-320P →+0.472+5.366<.001.00531
STADMIR3675 →+0.368+5.798<.001.00331
UCECPPIL2 →+0.387+2.818.006.00131
UCECCRYBB2P1 →+0.493+3.467.005.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,896 associations by consensus.

RNA5SP136 by SLC25A1 expression — UCEC

Box plot of RNA5SP136 in SLC25A1-low vs SLC25A1-high samples in UCEC.

Explore this box plot interactively →

Exploration