SLC22A31

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC22A31 mutation is significantly associated with the RNA expression of many other genes, with 12 significant associations in total. STOMACH shows the largest number of these associations.

The most reproducible SLC22A31-associated genes across cancer lineages are LHCGR, VAX1, and ADCY8. Each is linked with SLC22A31 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC22A31-to-partner and partner-to-SLC22A31 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, LHCGR grouped by SLC22A31-low versus SLC22A31-high in STOMACH.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC22A31→partner) and Y-score (partner→SLC22A31) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STOMACHLHCGR →+0.047+4.280<.001.00131
STOMACHVAX1 →+0.431+4.050.002.00231
STOMACHADCY8 →+0.071+3.830.003.00531
STOMACHDCSTAMP →+0.190+3.432<.001.00831
STOMACHTSBP1 →+0.039+3.794.002.00331
STOMACHTSGA13 →+0.021+3.632<.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 12 associations by consensus.

LHCGR by SLC22A31 expression — STOMACH

Box plot of LHCGR in SLC22A31-low vs SLC22A31-high samples in STOMACH.

Explore this box plot interactively →

Exploration