SLC20A1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC20A1 mutation is significantly associated with the RNA expression of many other genes, with 4,263 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC20A1-associated genes across cancer lineages are HSPD1P12, RN7SKP20, and MAGT1. Each is linked with SLC20A1 in more than 2 cancer types. Because this analysis shows association rather than direction, both SLC20A1-to-partner and partner-to-SLC20A1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, HSPD1P12 grouped by SLC20A1-low versus SLC20A1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC20A1→partner) and Y-score (partner→SLC20A1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECHSPD1P12 →+0.175+1.741<.001.00433
BLCARN7SKP20 →+0.093+4.618<.001<.00132
UCECMAGT1 →+0.494+2.081.003.00132
UCECHNRNPL →+0.361+2.439.005.00132
UCECPNPO →+0.625+2.070<.001.00132
UCECPSMD11 →+0.570+2.960<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,263 associations by consensus.

HSPD1P12 by SLC20A1 expression — UCEC

Box plot of HSPD1P12 in SLC20A1-low vs SLC20A1-high samples in UCEC.

Explore this box plot interactively →

Exploration