SLC1A6

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC1A6 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,709 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SLC1A6-associated proteins across cancer lineages are TDRKH, PALM_S116, and ZBTB7A. Each is linked with SLC1A6 in more than 2 cancer types. Because this analysis shows association rather than direction, both SLC1A6-to-partner and partner-to-SLC1A6 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC1A6 versus TDRKH in LSCC, with a Pearson correlation of 0.39.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC1A6→partner) and Y-score (partner→SLC1A6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCTDRKH →+0.403+0.841.002<.00133
GBMPALM_S116 →+0.723+0.534<.001<.00133
LSCCZBTB7A →-0.220-0.634.002<.00132
GBMSHROOM3_S439 →-0.708-0.829<.001<.00132
BRCABCAT2 →-0.531-0.647<.001.00632
GBMCIT →+0.684+0.709<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,709 associations by consensus.

SLC1A6 vs TDRKH — LSCC

Per-sample scatter of SLC1A6 vs TDRKH in LSCC (Pearson r = 0.39).

Explore this scatter interactively →

Exploration