SLC1A1

Across TCGA patient cohorts, SLC1A1 protein abundance is significantly associated with the RNA expression of many other genes, with 6,987 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SLC1A1-associated genes across cancer lineages are TMCO3, SDR16C5, and TSPAN1. Each is linked with SLC1A1 in more than 2 cancer types. Because this analysis shows association rather than direction, both SLC1A1-to-partner and partner-to-SLC1A1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC1A1 versus TMCO3 in COAD, with a Pearson correlation of 0.34.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC1A1→partner) and Y-score (partner→SLC1A1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	TMCO3 →	+0.560	+0.692	.007	.001	3	3
LSCC	SDR16C5 →	+1.145	+0.577	<.001	.002	3	3
BRCA	TSPAN1 →	+1.943	+0.984	.001	.001	3	3
BRCA	GALNT5 →	+1.344	+0.947	<.001	.004	3	3
PDAC	IQUB →	+0.762	+0.521	.002	.004	3	3
GBM	FAM107B →	+0.687	+0.550	.001	.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,987 associations by consensus.

SLC1A1 vs TMCO3 — COAD

Explore this scatter interactively →