SLC18B1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC18B1 mutation is significantly associated with the total protein of many other genes, with 10 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC18B1-associated genes across cancer lineages are FoxM1, Rab25, and EGFR_pY1068. Each is linked with SLC18B1 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC18B1-to-partner and partner-to-SLC18B1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, FoxM1 grouped by SLC18B1-low versus SLC18B1-high in LUSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC18B1→partner) and Y-score (partner→SLC18B1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUSCFoxM1 →+0.384+3.009.009.01932
UCECRab25 →-0.489-3.169.003.01932
UCECEGFR_pY1068 →-0.272-2.321.031.03531
UCECJNK_pT183_Y185 →-0.213-3.000.012.03631
UCECJNK2 →+0.232+2.321.020.03531
UCECPDCD4 →-0.689-3.459.003.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 10 associations by consensus.

FoxM1 by SLC18B1 expression — LUSC

Box plot of FoxM1 in SLC18B1-low vs SLC18B1-high samples in LUSC.

Explore this box plot interactively →

Exploration