SLC18A3

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC18A3 RNA expression is significantly associated with the go_rna of many other GO terms, with 1,856 significant associations in total. BONE shows the largest number of these associations.

The most reproducible SLC18A3-associated GO terms across cancer lineages are Regulation of nucleotide-excision repair, Nucleosome organization, and Nucleosome disassembly. Each is linked with SLC18A3 in more than 3 cancer types. Because this analysis shows association rather than direction, both SLC18A3-to-partner and partner-to-SLC18A3 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC18A3→partner) and Y-score (partner→SLC18A3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BONERegulation of nucleotide-excision repair →+0.117+1.251<.001.00134
BONENucleosome organization →+0.090+1.234<.001.00134
BONENucleosome disassembly →+0.152+1.517<.001<.00134
LARGE_INTESTINERegulation of protein localization to chromatin →+0.077+0.003.006.00333
LARGE_INTESTINELysosome organization →+0.034+0.003.006.00133
LARGE_INTESTINELytic vacuole organization →+0.034+0.003.006.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,856 associations by consensus.

Exploration