SLC17A7

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC17A7 protein abundance is significantly associated with the RNA expression of many other genes, with 4,211 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SLC17A7-associated genes across cancer lineages are YPEL1, SNRPD3, and PRODH. Each is linked with SLC17A7 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC17A7-to-partner and partner-to-SLC17A7 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC17A7 versus YPEL1 in GBM, with a Pearson correlation of 0.27.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC17A7→partner) and Y-score (partner→SLC17A7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMYPEL1 →+0.548+0.766<.001.00131
GBMSNRPD3 →+0.375+0.811.002.00131
GBMPRODH →+0.689+0.773<.001<.00131
GBMGRK3 →+0.451+0.890<.001<.00131
GBMSEZ6L →+1.630+0.801<.001<.00131
GBMLGALS1 →-0.663-0.763.008.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,211 associations by consensus.

SLC17A7 vs YPEL1 — GBM

Per-sample scatter of SLC17A7 vs YPEL1 in GBM (Pearson r = 0.27).

Explore this scatter interactively →

Exploration