SLC17A5

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC17A5 mutation is significantly associated with the RNA expression of many other genes, with 1,735 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC17A5-associated genes across cancer lineages are RNA5SP436, SPATA31E3P, and LINC02103. Each is linked with SLC17A5 in more than 2 cancer types. Because this analysis shows association rather than direction, both SLC17A5-to-partner and partner-to-SLC17A5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA5SP436 grouped by SLC17A5-low versus SLC17A5-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC17A5→partner) and Y-score (partner→SLC17A5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRNA5SP436 →+0.407+3.559<.001<.00133
BRCASPATA31E3P →+0.009+4.721<.001.00732
BRCALINC02103 →+0.290+4.721<.001.00732
LUADOR2AP1 →+0.091+6.584<.001.00132
LGGRNU6-480P →+0.313+7.977<.001.00732
BLCARAD52P1 →+0.052+7.040<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,735 associations by consensus.

RNA5SP436 by SLC17A5 expression — UCEC

Box plot of RNA5SP436 in SLC17A5-low vs SLC17A5-high samples in UCEC.

Explore this box plot interactively →

Exploration