SLC17A2

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC17A2 mutation is significantly associated with the total protein of many other genes, with 34 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC17A2-associated genes across cancer lineages are HER2_pY1248, 14-3-3_beta, and Heregulin. Each is linked with SLC17A2 in more than 2 cancer types. Because this analysis shows association rather than direction, both SLC17A2-to-partner and partner-to-SLC17A2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, HER2_pY1248 grouped by SLC17A2-low versus SLC17A2-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC17A2→partner) and Y-score (partner→SLC17A2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMHER2_pY1248 →-0.105-1.999.040.00233
UCEC14-3-3_beta →-0.121-2.432.005.01832
UCECHeregulin →-0.169-2.115.001.01932
UCECRab11 →-0.145-3.302.022.01032
UCECCaspase-7-cleavedD198 →+0.603+2.115.020.01932
UCECCD31 →-0.127-2.115.048.01932
Each partner links to its Q-omics profile. Showing the 6 strongest of 34 associations by consensus.

HER2_pY1248 by SLC17A2 expression — SKCM

Box plot of HER2_pY1248 in SLC17A2-low vs SLC17A2-high samples in SKCM.

Explore this box plot interactively →

Exploration