SLC16A4

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC16A4 protein abundance is significantly associated with the RNA expression of many other genes, with 2,803 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SLC16A4-associated genes across cancer lineages are PSMC3IP, E2F7, and CHAF1A. Each is linked with SLC16A4 in more than 2 cancer types. Because this analysis shows association rather than direction, both SLC16A4-to-partner and partner-to-SLC16A4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC16A4 versus PSMC3IP in LSCC, with a Pearson correlation of -0.40.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC16A4→partner) and Y-score (partner→SLC16A4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCPSMC3IP →-0.469-0.765.001.00133
LUADE2F7 →-1.219-0.755<.001.00433
LUADCHAF1A →-0.885-0.795<.001.00133
LUADANKRD36 →-0.446-0.559<.001.00333
GBMFAM83D →-1.015-0.555<.001.00432
LSCCFANCE →-0.924-1.160.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,803 associations by consensus.

SLC16A4 vs PSMC3IP — LSCC

Per-sample scatter of SLC16A4 vs PSMC3IP in LSCC (Pearson r = -0.40).

Explore this scatter interactively →

Exploration