SLC13A5

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC13A5 mutation is significantly associated with the total protein of many other genes, with 32 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC13A5-associated genes across cancer lineages are GAPDH, Src_pY527, and ATM. Each is linked with SLC13A5 in more than 2 cancer types. Because this analysis shows association rather than direction, both SLC13A5-to-partner and partner-to-SLC13A5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, GAPDH grouped by SLC13A5-low versus SLC13A5-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC13A5→partner) and Y-score (partner→SLC13A5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMGAPDH →+0.578+2.321.027.03333
UCECSrc_pY527 →-0.402-2.690.006.00633
UCECATM →-0.414-2.102.007.01633
UCECeEF2 →+0.282+1.247.020.04532
UCECeIF4E →+0.200+1.807.005.00432
UCECp38-MAPK_pT180_Y182 →-0.389-1.501.011.01532
Each partner links to its Q-omics profile. Showing the 6 strongest of 32 associations by consensus.

GAPDH by SLC13A5 expression — SKCM

Box plot of GAPDH in SLC13A5-low vs SLC13A5-high samples in SKCM.

Explore this box plot interactively →

Exploration