SLC12A7

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC12A7 mutation is significantly associated with the RNA expression of many other genes, with 775 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible SLC12A7-associated genes across cancer lineages are CD1A, OR10W1, and MTFMT. Each is linked with SLC12A7 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC12A7-to-partner and partner-to-SLC12A7 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CD1A grouped by SLC12A7-low versus SLC12A7-high in SOFT_TISSUE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC12A7→partner) and Y-score (partner→SLC12A7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SOFT_TISSUECD1A →+0.019+3.584<.001.00432
LARGE_INTESTINEOR10W1 →+0.007+2.655<.001.00132
LARGE_INTESTINEMTFMT →+0.459+2.628.007.00232
LARGE_INTESTINEMAPK8 →+0.703+2.800.001.00132
LARGE_INTESTINEKCTD20 →+0.633+2.628<.001.00232
BLOOD_LeukemiaTTC33 →+0.699+3.470<.001.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 775 associations by consensus.

CD1A by SLC12A7 expression — SOFT_TISSUE

Box plot of CD1A in SLC12A7-low vs SLC12A7-high samples in SOFT_TISSUE.

Explore this box plot interactively →

Exploration