SLC12A5-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, SLC12A5-AS1 RNA differs between tumor and matched normal tissue in 14 of 18 cancer types tested, making tumor–normal expression one of SLC12A5-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in head and neck squamous cell carcinoma (HNSC), where SLC12A5-AS1 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types SLC12A5-AS1 is over-expressed in tumor.

HNSC, KIRC, and THCA are the cancer types where SLC12A5-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in SLC12A5-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
HNSCFemaleAll+0.497<.00112view →
KIRCMaleIII,IV+0.328<.00111view →
THCAAllII,III,IV+0.346<.00110view →
LUADAllIII,IV+0.728<.0019view →
LIHCAllIII,IV+0.567<.0019view →
STADAllII,III,IV+0.507<.0018view →
COADAllII,III,IV+0.434<.0018view →
KICHAllAll+0.238<.0017view →
UCECAllAll+0.728<.0016view →
BRCAFemaleII,III,IV+0.336<.0016view →
KIRPAllAll+0.262.0035view →
LUSCMaleAll+0.615<.0014view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 14 lineages.

Exploration