SLC12A1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC12A1 mutation is significantly associated with the RNA expression of many other genes, with 6,519 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC12A1-associated genes across cancer lineages are OIP5, CACYBP, and DUT. Each is linked with SLC12A1 in more than 4 cancer types. Because this analysis shows association rather than direction, both SLC12A1-to-partner and partner-to-SLC12A1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OIP5 grouped by SLC12A1-low versus SLC12A1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC12A1→partner) and Y-score (partner→SLC12A1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECOIP5 →+0.802+2.191<.001<.00135
STADCACYBP →+0.702+3.622<.001.00135
SKCMDUT →+0.573+3.604.001.00135
SKCMPARP2 →+0.599+3.870<.001<.00135
UCECMRPL34 →+0.247+1.654.006.00135
SKCMEXO1 →+0.605+3.472.008.00235
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,519 associations by consensus.

OIP5 by SLC12A1 expression — UCEC

Box plot of OIP5 in SLC12A1-low vs SLC12A1-high samples in UCEC.

Explore this box plot interactively →

Exploration