SLC10A4

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC10A4 mutation is significantly associated with the total protein of many other genes, with 15 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC10A4-associated genes across cancer lineages are PDCD4, 14-3-3_beta, and A-Raf_pS299. Each is linked with SLC10A4 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC10A4-to-partner and partner-to-SLC10A4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PDCD4 grouped by SLC10A4-low versus SLC10A4-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC10A4→partner) and Y-score (partner→SLC10A4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECPDCD4 →-0.747-2.990<.001.03632
UCEC14-3-3_beta →-0.118-2.973.015.03531
UCECA-Raf_pS299 →-0.176-2.999.002.03531
UCECKu80 →+0.259+2.472.023.01131
UCECPCNA →+0.381+3.584<.001.00231
UCECSTAT3_pY705 →-0.353-2.999.005.03531
Each partner links to its Q-omics profile. Showing the 6 strongest of 15 associations by consensus.

PDCD4 by SLC10A4 expression — UCEC

Box plot of PDCD4 in SLC10A4-low vs SLC10A4-high samples in UCEC.

Explore this box plot interactively →

Exploration