SLA

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLA RNA expression is significantly associated with the go_rna of many other GO terms, with 2,165 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible SLA-associated GO terms across cancer lineages are Golgi vesicle transport, Negative regulation of myoblast fusion, and Negative regulation of TOR signaling. Each is linked with SLA in more than 5 cancer types. Because this analysis shows association rather than direction, both SLA-to-partner and partner-to-SLA results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Golgi vesicle transport grouped by SLA-low versus SLA-high in LARGE_INTESTINE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SLA→partner) and Y-score (partner→SLA) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEGolgi vesicle transport →+0.051+0.105<.001<.00136
LARGE_INTESTINENegative regulation of myoblast fusion →+0.084+0.092<.001.00236
LARGE_INTESTINENegative regulation of TOR signaling →+0.047+0.109<.001.00236
LARGE_INTESTINENegative regulation of syncytium formation by plasma membrane fusion →+0.077+0.087<.001.00336
BLOOD_LeukemiaPeptidyl-serine autophosphorylation →+0.084+2.160<.001<.00136
LARGE_INTESTINERegulation of syncytium formation by plasma membrane fusion →+0.056+0.079<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,165 associations by consensus.

Golgi vesicle transport by SLA expression — LARGE_INTESTINE

Box plot of Golgi vesicle transport in SLA-low vs SLA-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration