SIM1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SIM1 mutation is significantly associated with the total protein of many other genes, with 60 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SIM1-associated genes across cancer lineages are TFRC, eEF2K, and STAT5a. Each is linked with SIM1 in more than 2 cancer types. Because this analysis shows association rather than direction, both SIM1-to-partner and partner-to-SIM1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TFRC grouped by SIM1-low versus SIM1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SIM1→partner) and Y-score (partner→SIM1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECTFRC →+0.433+2.321.005.00533
UCECeEF2K →+0.234+1.584.022.03433
LUADSTAT5a →+0.392+2.338.042.01932
UCECERK2 →+0.154+1.765.006.01132
UCECFoxM1 →+0.152+1.241.046.01532
UCECHeregulin →-0.112-1.523.002.00632
Each partner links to its Q-omics profile. Showing the 6 strongest of 60 associations by consensus.

TFRC by SIM1 expression — UCEC

Box plot of TFRC in SIM1-low vs SIM1-high samples in UCEC.

Explore this box plot interactively →

Exploration