SIKE1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SIKE1 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,439 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SIKE1-associated proteins across cancer lineages are TRIM33, MSH2, and PPP1R10. Each is linked with SIKE1 in more than 7 cancer types. Because this analysis shows association rather than direction, both SIKE1-to-partner and partner-to-SIKE1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SIKE1 versus TRIM33 in HNSC, with a Pearson correlation of 0.43.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SIKE1→partner) and Y-score (partner→SIKE1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCTRIM33 →+0.289+0.766<.001<.00138
GBMMSH2 →+0.428+0.360<.001.00335
GBMPPP1R10 →+0.302+0.330<.001.00535
GBMRBM15 →+0.217+0.409<.001<.00135
LSCCSF3B1 →+0.180+0.422<.001.00135
GBMSMARCA4 →+0.343+0.403<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,439 associations by consensus.

SIKE1 vs TRIM33 — HNSC

Per-sample scatter of SIKE1 vs TRIM33 in HNSC (Pearson r = 0.43).

Explore this scatter interactively →

Exploration