SHLD2P3

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SHLD2P3 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,151 significant associations in total. STAD shows the largest number of these associations.

The most reproducible SHLD2P3-associated GO terms across cancer lineages are Regulation of autophagosome assembly, Lysosomal transport, and Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay. Each is linked with SHLD2P3 in more than 29 cancer types. Because this analysis shows association rather than direction, both SHLD2P3-to-partner and partner-to-SHLD2P3 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SHLD2P3→partner) and Y-score (partner→SHLD2P3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UVMRegulation of autophagosome assembly →+0.058+0.169<.001<.001330
STADLysosomal transport →+0.056+0.128<.001<.001330
ESCANuclear-transcribed mRNA catabolic process, nonsense-mediated decay →+0.077+0.365<.001<.001329
UCSRegulation of organelle assembly →+0.050+0.374<.001<.001329
STADPositive regulation of organelle assembly →+0.053+0.130<.001<.001329
UVMAutophagosome organization →+0.056+0.180<.001<.001329
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,151 associations by consensus.

Exploration