SHISA9

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SHISA9 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,228 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SHISA9-associated proteins across cancer lineages are ATP9A, CALR, and KRT8_S457. Each is linked with SHISA9 in more than 2 cancer types. Because this analysis shows association rather than direction, both SHISA9-to-partner and partner-to-SHISA9 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SHISA9 versus ATP9A in LUAD, with a Pearson correlation of 0.30.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SHISA9→partner) and Y-score (partner→SHISA9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADATP9A →+0.407+0.138<.001.00533
GBMCALR →-0.239-0.653<.001.00433
OVKRT8_S457 →+1.474+1.895.003.00933
LSCCPPP1R18_S224 →-0.586-0.752<.001.00733
GBMHPS5_S563 →-0.389-0.956<.001<.00133
CCRCCTGFB1 →-0.386-0.880.009.00433
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,228 associations by consensus.

SHISA9 vs ATP9A — LUAD

Per-sample scatter of SHISA9 vs ATP9A in LUAD (Pearson r = 0.30).

Explore this scatter interactively →

Exploration