SHISA7

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SHISA7 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,259 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SHISA7-associated proteins across cancer lineages are ACBD3, SEC31A, and COPA. Each is linked with SHISA7 in more than 3 cancer types. Because this analysis shows association rather than direction, both SHISA7-to-partner and partner-to-SHISA7 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SHISA7→partner) and Y-score (partner→SHISA7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAACBD3 →-0.168-0.077.002.00634
GBMSEC31A →-0.284-1.503<.001<.00133
GBMCOPA →-0.191-0.820<.001<.00133
GBMCOPB1 →-0.164-0.982<.001<.00133
LSCCCOPG1 →-0.255-0.118<.001.00133
BRCAARCN1 →-0.209-0.092<.001.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,259 associations by consensus.

Exploration