SHC4

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SHC4 mutation is significantly associated with the total protein of many other genes, with 47 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SHC4-associated genes across cancer lineages are PCNA, eEF2, and Notch1. Each is linked with SHC4 in more than 2 cancer types. Because this analysis shows association rather than direction, both SHC4-to-partner and partner-to-SHC4 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SHC4→partner) and Y-score (partner→SHC4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECPCNA →+0.272+2.700<.001.00533
UCECeEF2 →+0.370+2.584.002.01032
UCECNotch1 →+0.139+2.235.003.00532
UCECS6_pS240_S244 →+0.355+1.514.010.01532
UCECTFRC →+0.379+1.247.036.04532
UCECCaspase-8 →-0.229-3.143.007<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 47 associations by consensus.

Exploration