SH3TC2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SH3TC2 mutation is significantly associated with the RNA expression of many other genes, with 4,390 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SH3TC2-associated genes across cancer lineages are ZDHHC3, SARS1, and RAD51. Each is linked with SH3TC2 in more than 3 cancer types. Because this analysis shows association rather than direction, both SH3TC2-to-partner and partner-to-SH3TC2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ZDHHC3 grouped by SH3TC2-low versus SH3TC2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SH3TC2→partner) and Y-score (partner→SH3TC2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECZDHHC3 →+0.222+1.579.006.00434
UCECSARS1 →+0.368+1.238<.001.00634
UCECRAD51 →+0.821+1.928<.001<.00134
UCECSAR1A →+0.297+1.625.002.00234
UCECYARS1 →+0.527+1.594<.001<.00134
UCECCCT4 →+0.387+1.217.008.00634
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,390 associations by consensus.

ZDHHC3 by SH3TC2 expression — UCEC

Box plot of ZDHHC3 in SH3TC2-low vs SH3TC2-high samples in UCEC.

Explore this box plot interactively →

Exploration