SH3KBP1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SH3KBP1 RNA expression is significantly associated with the protein abundance of many other proteins, with 16,273 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SH3KBP1-associated proteins across cancer lineages are SH3KBP1_S587, RGS10, and SH3KBP1_S503. Each is linked with SH3KBP1 in more than 8 cancer types. Because this analysis shows association rather than direction, both SH3KBP1-to-partner and partner-to-SH3KBP1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SH3KBP1 versus SH3KBP1_S587 in OV, with a Pearson correlation of 0.42.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SH3KBP1→partner) and Y-score (partner→SH3KBP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVSH3KBP1_S587 →+0.965+0.715.001.00139
CCRCCRGS10 →+0.435+0.456<.001<.00137
LSCCSH3KBP1_S503 →+0.782+0.548<.001<.00137
LSCCSH3KBP1_S511 →+0.701+0.632<.001<.00137
GBMMICAL1 →+0.412+0.526<.001<.00137
GBMRCSD1 →+0.628+0.484<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 16,273 associations by consensus.

SH3KBP1 vs SH3KBP1_S587 — OV

Per-sample scatter of SH3KBP1 vs SH3KBP1_S587 in OV (Pearson r = 0.42).

Explore this scatter interactively →

Exploration