SH3GL1

mass-spec protein — tumor vs normal
Tumor vs Normalmass-specBox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, SH3GL1 mass-spec protein differs between tumor and matched normal tissue in 5 of 18 cancer types tested, making tumor–normal expression one of SH3GL1’s most consistent transcriptional readouts.

The strongest signal is observed in clear cell renal cell carcinoma (CCRCC), where SH3GL1 mass-spec protein is more highly expressed in tumor relative to normal tissue. In most cancer types SH3GL1 is over-expressed in tumor, although a few such as HNSC and LUAD show the opposite, repressed pattern.

CCRCC, HNSC, and LSCC are the cancer types where SH3GL1 tumor–normal differential expression is most reproducible.

mass-spec protein tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in SH3GL1 mass-spec protein (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
CCRCCAllIV+0.668<.00112view →
HNSCMaleIV−0.288<.0018view →
LSCCMaleII,III,IV+0.161<.0018view →
PDACFemaleAll+0.295<.0014view →
LUADFemaleIII,IV−0.232.0331view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 5 strongest of 5 lineages.

SH3GL1–CCRCC

Tumor-vs-normal mass-spec protein box plot for SH3GL1 in CCRCC.

Open the CCRCC breakdown →

Exploration