SH3D21

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SH3D21 mutation is significantly associated with the RNA expression of many other genes, with 735 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SH3D21-associated genes across cancer lineages are EXOG, PKN3, and SNRNP25. Each is linked with SH3D21 in more than 1 cancer types. Because this analysis shows association rather than direction, both SH3D21-to-partner and partner-to-SH3D21 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SH3D21→partner) and Y-score (partner→SH3D21) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECEXOG →+0.361+2.321.006.00632
UCECPKN3 →+0.697+2.332<.001.00332
UCECSNRNP25 →+0.421+2.397.007.00332
UCECMOCS2 →+0.472+2.343.002.00332
UCECPAFAH1B1 →+0.485+3.748.001<.00132
UCECITGAE →+0.376+3.191.006.00932
Each partner links to its Q-omics profile. Showing the 6 strongest of 735 associations by consensus.

Exploration