SH3BGR

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SH3BGR RNA expression is significantly associated with the go_rna of many other GO terms, with 3,018 significant associations in total. CNS shows the largest number of these associations.

The most reproducible SH3BGR-associated GO terms across cancer lineages are Vesicle coating, Axo-dendritic transport, and Aerobic electron transport chain. Each is linked with SH3BGR in more than 11 cancer types. Because this analysis shows association rather than direction, both SH3BGR-to-partner and partner-to-SH3BGR results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SH3BGR→partner) and Y-score (partner→SH3BGR) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OESOPHAGUSVesicle coating →+0.085+0.874.005.003312
OESOPHAGUSAxo-dendritic transport →+0.065+1.146.003.005310
UPPER_AERODIGESTIVE_TRACTAerobic electron transport chain →+0.086+0.587<.001.00239
LIVERRegulation of TORC1 signaling →+0.049+1.154.001.00139
UPPER_AERODIGESTIVE_TRACTMitochondrial electron transport, NADH to ubiquinone →+0.080+0.701<.001<.00139
UPPER_AERODIGESTIVE_TRACTRespiratory electron transport chain →+0.083+0.898.003<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,018 associations by consensus.

Exploration