SH2D4A

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SH2D4A protein abundance is significantly associated with the RNA expression of many other genes, with 10,596 significant associations in total. COAD shows the largest number of these associations.

The most reproducible SH2D4A-associated genes across cancer lineages are FDFT1, INTS10, and DCTN6. Each is linked with SH2D4A in more than 7 cancer types. Because this analysis shows association rather than direction, both SH2D4A-to-partner and partner-to-SH2D4A results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SH2D4A versus FDFT1 in COAD, with a Pearson correlation of 0.42.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SH2D4A→partner) and Y-score (partner→SH2D4A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADFDFT1 →+1.019+0.429<.001<.00138
UCECINTS10 →+0.771+0.647<.001<.00137
BRCADCTN6 →+0.559+0.419.002.00237
COADPPP2CB →+0.628+0.482<.001<.00137
HNSCPPP2R2A →+0.518+0.524<.001<.00137
COADSARAF →+0.722+0.509<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,596 associations by consensus.

SH2D4A vs FDFT1 — COAD

Per-sample scatter of SH2D4A vs FDFT1 in COAD (Pearson r = 0.42).

Explore this scatter interactively →

Exploration