SGPP2

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SGPP2 RNA expression is significantly associated with the protein abundance of many other proteins, with 14,567 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SGPP2-associated proteins across cancer lineages are SPAST, SFN, and HOOK2. Each is linked with SGPP2 in more than 4 cancer types. Because this analysis shows association rather than direction, both SGPP2-to-partner and partner-to-SGPP2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SGPP2 versus SPAST in LSCC, with a Pearson correlation of 0.29.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SGPP2→partner) and Y-score (partner→SGPP2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCSPAST →+0.382+0.882<.001<.00135
UCECSFN →+0.724+0.713.002<.00134
UCECHOOK2 →+0.219+0.467<.001<.00134
GBMMARK2 →+0.203+0.569<.001<.00134
UCECARHGEF5 →+0.342+0.740<.001<.00134
LUADLAD1 →+0.523+0.857.006<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,567 associations by consensus.

SGPP2 vs SPAST — LSCC

Per-sample scatter of SGPP2 vs SPAST in LSCC (Pearson r = 0.29).

Explore this scatter interactively →

Exploration