SGO1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SGO1 protein abundance is significantly associated with the RNA expression of many other genes, with 1,879 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SGO1-associated genes across cancer lineages are SLC40A1, SLC49A3, and CYP21A1P. Each is linked with SGO1 in more than 1 cancer types. Because this analysis shows association rather than direction, both SGO1-to-partner and partner-to-SGO1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SGO1 versus SLC40A1 in BRCA, with a Pearson correlation of -0.49.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SGO1→partner) and Y-score (partner→SGO1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCASLC40A1 →-1.829-0.456.003.00532
BRCASLC49A3 →-1.751-0.504.001.00432
BRCACYP21A1P →-1.738-0.473<.001.00332
BRCASLC4A8 →-1.977-0.742<.001<.00132
LSCCCYTH4 →-0.963-0.843<.001.00731
LSCCFOXRED2 →+0.915+0.833.002.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,879 associations by consensus.

SGO1 vs SLC40A1 — BRCA

Per-sample scatter of SGO1 vs SLC40A1 in BRCA (Pearson r = -0.49).

Explore this scatter interactively →

Exploration