SGCG

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SGCG RNA expression is significantly associated with the protein abundance of many other proteins, with 18,408 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SGCG-associated proteins across cancer lineages are ADIPOQ, HDGFL3, and PALM. Each is linked with SGCG in more than 5 cancer types. Because this analysis shows association rather than direction, both SGCG-to-partner and partner-to-SGCG results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SGCG versus ADIPOQ in BRCA, with a Pearson correlation of 0.26.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SGCG→partner) and Y-score (partner→SGCG) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAADIPOQ →+0.586+1.102<.001.00135
GBMHDGFL3 →+0.685+0.804<.001<.00135
BRCAPALM →+0.853+0.956<.001<.00135
LUADPGAM1_S31 →-0.529-0.523<.001<.00135
BRCASORBS1 →+0.894+1.099<.001<.00135
BRCAKANK2 →+0.599+0.907<.001.00335
Each partner links to its Q-omics profile. Showing the 6 strongest of 18,408 associations by consensus.

SGCG vs ADIPOQ — BRCA

Per-sample scatter of SGCG vs ADIPOQ in BRCA (Pearson r = 0.26).

Explore this scatter interactively →

Exploration