SGCD

Across TCGA cell cohorts, SGCD RNA expression is significantly associated with the go_rna of many other GO terms, with 3,570 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible SGCD-associated GO terms across cancer lineages are Nucleoside triphosphate biosynthetic process, Ribonucleoside triphosphate biosynthetic process, and Response to symbiont. Each is linked with SGCD in more than 6 cancer types. Because this analysis shows association rather than direction, both SGCD-to-partner and partner-to-SGCD results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Nucleoside triphosphate biosynthetic process grouped by SGCD-low versus SGCD-high in OVARY.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SGCD→partner) and Y-score (partner→SGCD) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OVARY	Nucleoside triphosphate biosynthetic process →	+0.079	+0.740	<.001	.004	3	7
OVARY	Ribonucleoside triphosphate biosynthetic process →	+0.081	+0.736	<.001	.004	3	6
SOFT_TISSUE	Response to symbiont →	-1.024	-2.016	<.001	<.001	3	6
LUNG_SCLC	Nucleoside triphosphate metabolic process →	+0.074	+1.170	<.001	<.001	3	6
SKIN	Cellular respiration →	+0.066	+1.571	.002	.008	3	6
SKIN	Hexose biosynthetic process →	+0.100	+1.730	.001	.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,570 associations by consensus.

Nucleoside triphosphate biosynthetic process by SGCD expression — OVARY

Explore this box plot interactively →